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Bioinformatics for proteins: sequence, structure and function

Schedule for Protein Structure (Block 4)

Week Text To Read Assignments
W 45 Protein alignments
  1. How do I align two proteins ?
  2. Detection of related proteins.
W 46 Sequence analysis
  1. How do I detect a pattern in a protein
  2. Logo creations.
W 47 Protein families and structure prediction
  1. Does my protein belong to a known protein family?
  2. Is my protein related to a protein of known structure?
  3. Structural databases.
W 48 Secondary structure predictions
  1. Can I predict the secondary structure of a protein?
  2. Can I predict what part of a protein is in a membrane?

Here is a list of who has passed the assignments.

Arne Elofsson
Last modified: Wed Nov 12 18:44:27 CET 2003
Arne Elofsson
Stockholm Bioinformatics Center,
Department of Biochemistry,
Arrheniuslaboratoriet
Stockholms Universitet
10691 Stockholm, Sweden
Tel: +46-(0)8/161553
Fax: +46-(0)8/158057
Hem: +46-(0)8/6413158
Email: arne@sbc.su.se
WWW: /~arne/